Samara Ren
Samara Ren
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A Combinatorial Method for Connecting BHV Spaces Representing Different Numbers of Taxa
The phylogenetic tree space introduced by Billera, Holmes, and Vogtmann (BHV tree space) is a CAT(0) continuous space that represents trees with edge weights with an intrinsic geodesic distance measure. The geodesic distance measure unique to BHV tree space is well known to be computable in polynomial time, which makes it a potentially powerful tool for optimization problems in phylogenetics and phylogenomics. Specifically, there is significant interest in comparing and combining phylogenetic …
Yingying Ren
,
Sihan Zha
,
Jingwen Bi
,
José A. Sanchez
,
Cara Monical
,
Michelle Delcourt
,
Rosemary K. Guzman
,
Ruth Davidson
December, 2017
Arxiv
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